Semi-supervised dictionary learning with graph regularization and active points

 

Authors: Khanh-Hung TranFred-Maurice Ngole-Mboula, J-L. Starck
Journal: SIAM Journal on Imaging Sciences
Year: 2020
DOI: 10.1137/19M1285469
Download: arXiv


Abstract

Supervised Dictionary Learning has gained much interest in the recent decade and has shown significant performance improvements in image classification. However, in general, supervised learning needs a large number of labelled samples per class to achieve an acceptable result. In order to deal with databases which have just a few labelled samples per class, semi-supervised learning, which also exploits unlabelled samples in training phase is used. Indeed, unlabelled samples can help to regularize the learning model, yielding an improvement of classification accuracy. In this paper, we propose a new semi-supervised dictionary learning method based on two pillars: on one hand, we enforce manifold structure preservation from the original data into sparse code space using Locally Linear Embedding, which can be considered a regularization of sparse code; on the other hand, we train a semi-supervised classifier in sparse code space. We show that our approach provides an improvement over state-of-the-art semi-supervised dictionary learning methods
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Deep Learning for space-variant deconvolution in galaxy surveys

 

Authors: Florent Sureau, Alexis Lechat, J-L. Starck
Journal: Astronomy and Astrophysics
Year: 2020
DOI: 10.1051/0004-6361/201937039
Download: ADS | arXiv


Abstract

The deconvolution of large survey images with millions of galaxies requires developing a new generation of methods that can take a space-variant point spread function into account. These methods have also to be accurate and fast. We investigate how deep learning might be used to perform this task. We employed a U-net deep neural network architecture to learn parameters that were adapted for galaxy image processing in a supervised setting and studied two deconvolution strategies. The first approach is a post-processing of a mere Tikhonov deconvolution with closed-form solution, and the second approach is an iterative deconvolution framework based on the alternating direction method of multipliers (ADMM). Our numerical results based on GREAT3 simulations with realistic galaxy images and point spread functions show that our two approaches outperform standard techniques that are based on convex optimization, whether assessed in galaxy image reconstruction or shape recovery. The approach based on a Tikhonov deconvolution leads to the most accurate results, except for ellipticity errors at high signal-to-noise ratio. The ADMM approach performs slightly better in this case. Considering that the Tikhonov approach is also more computation-time efficient in processing a large number of galaxies, we recommend this approach in this scenario.

In the spirit of reproducible research, the codes will be made freely available on the CosmoStat website (http://www.cosmostat.org). The testing datasets will also be provided to repeat the experiments performed in this paper.

PySAP: Python Sparse Data Analysis Package for Multidisciplinary Image Processing

 

Authors: S. Farrens, A. Grigis, L. El Gueddari, Z. Ramzi, Chaithya G. R., S. Starck, B. Sarthou, H. Cherkaoui, P.Ciuciu, J-L. Starck
Journal: Astronomy and Computing
Year: 2020
DOI: 10.1016/j.ascom.2020.100402
Download: ADS | arXiv


Abstract

We present the open-source image processing software package PySAP (Python Sparse data Analysis Package) developed for the COmpressed Sensing for Magnetic resonance Imaging and Cosmology (COSMIC) project. This package provides a set of flexible tools that can be applied to a variety of compressed sensing and image reconstruction problems in various research domains. In particular, PySAP offers fast wavelet transforms and a range of integrated optimisation algorithms. In this paper we present the features available in PySAP and provide practical demonstrations on astrophysical and magnetic resonance imaging data.


Code

PySAP Code


Euclid: The reduced shear approximation and magnification bias for Stage IV cosmic shear experiments

Euclid: The reduced shear approximation and magnification bias for Stage IV cosmic shear experiments

Authors: A.C. Deshpande, ..., S. Casas, M. Kilbinger, V. Pettorino, S. Pires, J.-L. Starck, F. Sureau, et al.
Journal: Astronomy and Astrophysics
Year: 2020
DOI:  10.1051/0004-6361/201937323
Download:

ADS | arXiv

 


Abstract

Stage IV weak lensing experiments will offer more than an order of magnitude leap in precision. We must therefore ensure that our analyses remain accurate in this new era. Accordingly, previously ignored systematic effects must be addressed. In this work, we evaluate the impact of the reduced shear approximation and magnification bias, on the information obtained from the angular power spectrum. To first-order, the statistics of reduced shear, a combination of shear and convergence, are taken to be equal to those of shear. However, this approximation can induce a bias in the cosmological parameters that can no longer be neglected. A separate bias arises from the statistics of shear being altered by the preferential selection of galaxies and the dilution of their surface densities, in high-magnification regions. The corrections for these systematic effects take similar forms, allowing them to be treated together. We calculated the impact of neglecting these effects on the cosmological parameters that would be determined from Euclid, using cosmic shear tomography. To do so, we employed the Fisher matrix formalism, and included the impact of the super-sample covariance. We also demonstrate how the reduced shear correction can be calculated using a lognormal field forward modelling approach. These effects cause significant biases in Omega_m, sigma_8, n_s, Omega_DE, w_0, and w_a of -0.53 sigma, 0.43 sigma, -0.34 sigma, 1.36 sigma, -0.68 sigma, and 1.21 sigma, respectively. We then show that these lensing biases interact with another systematic: the intrinsic alignment of galaxies. Accordingly, we develop the formalism for an intrinsic alignment-enhanced lensing bias correction. Applying this to Euclid, we find that the additional terms introduced by this correction are sub-dominant.

Euclid preparation: VI. Verifying the Performance of Cosmic Shear Experiments

Euclid preparation: VI. Verifying the Performance of Cosmic Shear Experiments

Authors: Euclid Collaboration, P. Paykari, ..., S. Farrens, M. Kilbinger, V. Pettorino, S. Pires, J.-L. Starck, F. Sureau, et al.
Journal: Astronomy and Astrophysics
Year: 2020
DOI:  10.1051/0004-6361/201936980
Download:

ADS | arXiv

 


Abstract

Our aim is to quantify the impact of systematic effects on the inference of cosmological parameters from cosmic shear. We present an end-to-end approach that introduces sources of bias in a modelled weak lensing survey on a galaxy-by-galaxy level. Residual biases are propagated through a pipeline from galaxy properties (one end) through to cosmic shear power spectra and cosmological parameter estimates (the other end), to quantify how imperfect knowledge of the pipeline changes the maximum likelihood values of dark energy parameters. We quantify the impact of an imperfect correction for charge transfer inefficiency (CTI) and modelling uncertainties of the point spread function (PSF) for Euclid, and find that the biases introduced can be corrected to acceptable levels.

Benchmarking MRI Reconstruction Neural Networks on Large Public Datasets

Deep learning is starting to offer promising results for reconstruction in Magnetic Resonance Imaging (MRI). A lot of networks are being developed, but the comparisons remain hard because the frameworks used are not the same among studies, the networks are not properly re-trained, and the datasets used are not the same among comparisons. The recent release of a public dataset, fastMRI, consisting of raw k-space data, encouraged us to write a consistent benchmark of several deep neural networks for MR image reconstruction. This paper shows the results obtained for this benchmark, allowing to compare the networks, and links the open source implementation of all these networks in Keras. The main finding of this benchmark is that it is beneficial to perform more iterations between the image and the measurement spaces compared to having a deeper per-space network.

Reference:  Z. Ramzi, P. Ciuciu and J.-L. Starck. “Benchmarking MRI reconstruction neural networks on large public datasetsApplied Sciences, 10, 1816, 2020.  doi:10.3390/app10051816

Constraining neutrino masses with weak-lensing multiscale peak counts

Constraining neutrino masses with weak-lensing multiscale peak counts

Massive neutrinos influence the background evolution of the Universe as well as the growth of structure. Being able to model this effect and constrain the sum of their masses is one of the key challenges in modern cosmology. Weak-lensing cosmological constraints will also soon reach higher levels of precision with next-generation surveys like LSST, WFIRST and Euclid. In this context, we use the MassiveNus simulations to derive constraints on the sum of neutrino masses Mν , the present- day total matter density Ωm, and the primordial power spectrum normalization As in a tomographic setting. We measure the lensing power spectrum as second-order statistics along with peak counts as higher-order statistics on lensing convergence maps generated from the simulations. We investigate the impact of multi-scale filtering approaches on cosmological parameters by employing a starlet (wavelet) filter and a concatenation of Gaussian filters. In both cases peak counts perform better than the power spectrum on the set of parameters [Mν, Ωm, As] respectively by 63%, 40% and 72% when using a starlet filter and by 70%, 40% and 77% when using a multi-scale Gaussian. More importantly, we show that when using a multi-scale approach, joining power spectrum and peaks does not add any relevant information over considering just the peaks alone. While both multi-scale filters behave similarly, we find that with the starlet filter the majority of the information in the data covariance matrix is encoded in the diagonal elements; this can be an advantage when inverting the matrix, speeding up the numerical implementation. For the starlet case, we further identify the minimum resolution required to obtain constraints comparable to those achievable with the full wavelet decomposition and we show that the information contained in the coarse-scale map cannot be neglected.

Reference: Virginia Ajani, Austin Peel, Valeria Pettorino, Jean-Luc Starck, Zack Li, Jia Liu,  2020. More details in the paper

The first Deep Learning reconstruction of dark matter maps from weak lensing observational data

DeepMass: The first Deep Learning reconstruction of dark matter maps from weak lensing observational data (DES SV weak lensing data)

DeepMass

 This is the first reconstruction of dark matter maps from weak lensing observational data using deep learning. We train a convolution neural network (CNN) with a Unet based architecture on over 3.6 x 10^5 simulated data realisations with non-Gaussian shape noise and with cosmological parameters varying over a broad prior distribution.  Our DeepMass method is substantially more accurate than existing mass-mapping methods. With a validation set of 8000 simulated DES SV data realisations, compared to Wiener filtering with a fixed power spectrum, the DeepMass method improved the mean-square-error (MSE) by 11 per cent. With N-body simulated MICE mock data, we show that Wiener filtering with the optimal known power spectrum still gives a worse MSE than our generalised method with no input cosmological parameters; we show that the improvement is driven by the non-linear structures in the convergence. With higher galaxy density in future weak lensing data unveiling more non-linear scales, it is likely that deep learning will be a leading approach for mass mapping with Euclid and LSST.

Reference 1:  N. Jeffrey, F.  Lanusse, O. Lahav, J.-L. Starck,  "Learning dark matter map reconstructions from DES SV weak lensing data", Monthly Notices of the Royal Astronomical Society, in press, 2019.

 

Euclid: Non-parametric point spread function field recovery through interpolation on a Graph Laplacian

 

Authors: M.A. Schmitz, J.-L. Starck, F. Ngole Mboula, N. Auricchio, J. Brinchmann, R.I. Vito Capobianco, R. Clédassou, L. Conversi, L. Corcione, N. Fourmanoit, M. Frailis, B. Garilli, F. Hormuth, D. Hu, H. Israel, S. Kermiche, T. D. Kitching, B. Kubik, M. Kunz, S. Ligori, P.B. Lilje, I. Lloro, O. Mansutti, O. Marggraf, R.J. Massey, F. Pasian, V. Pettorino, F. Raison, J.D. Rhodes, M. Roncarelli, R.P. Saglia, P. Schneider, S. Serrano, A.N. Taylor, R. Toledo-Moreo, L. Valenziano, C. Vuerli, J. Zoubian
Journal: submitted to A&A
Year: 2019
Download:  arXiv

 


Abstract

Context. Future weak lensing surveys, such as the Euclid mission, will attempt to measure the shapes of billions of galaxies in order to derive cosmological information. These surveys will attain very low levels of statistical error and systematic errors must be extremely well controlled. In particular, the point spread function (PSF) must be estimated using stars in the field, and recovered with high accuracy.
Aims. This paper's contributions are twofold. First, we take steps toward a non-parametric method to address the issue of recovering the PSF field, namely that of finding the correct PSF at the position of any galaxy in the field, applicable to Euclid. Our approach relies solely on the data, as opposed to parametric methods that make use of our knowledge of the instrument. Second, we study the impact of imperfect PSF models on the shape measurement of galaxies themselves, and whether common assumptions about this impact hold true in a Euclid scenario.
Methods. We use the recently proposed Resolved Components Analysis approach to deal with the undersampling of observed star images. We then estimate the PSF at the positions of galaxies by interpolation on a set of graphs that contain information relative to its spatial variations. We compare our approach to PSFEx, then quantify the impact of PSF recovery errors on galaxy shape measurements through image simulations.
Results. Our approach yields an improvement over PSFEx in terms of PSF model and on observed galaxy shape errors, though it is at present not sufficient to reach the required Euclid accuracy. We also find that different shape measurement approaches can react differently to the same PSF modelling errors.